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  • Top cofit genes for PP_3786 from Pseudomonas putida KT2440

    aminotransferase
    SEED: Aspartate aminotransferase (EC 2.6.1.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3790 diaminopimelate epimerase no 0.77
    2 PP_3788 putative Non-ribosomal peptide synthetase no 0.75
    3 PP_3787 conserved protein of unknown function no 0.69
    4 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.61
    5 PP_3789 putative Efflux transporter no 0.55
    6 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase no 0.55
    7 PP_4922 Phosphomethylpyrimidine synthase no 0.55
    8 PP_3776 putative permease (RarD protein) no 0.54
    9 PP_3376 putative phosphonate dehydrogenase no 0.50
    10 PP_3785 conserved protein of unknown function no 0.49
    11 PP_2388 Transporter, LysE family no 0.48
    12 PP_1109 Transcriptional regulator, GntR family no 0.48
    13 PP_4684 conserved protein of unknown function with kinase-like domain no 0.47
    14 PP_5104 thiazole synthase no 0.46
    15 PP_1110 serine acetyltransferase no 0.45
    16 PP_1111 putative Synthetase no 0.45
    17 PP_2390 Transcriptional regulator, LysR family no 0.45
    18 PP_0420 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex no 0.43
    19 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer no 0.43
    20 PP_1426 L-aspartate oxidase no 0.42

    Or look for negative cofitness