• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PP_3768 from Pseudomonas putida KT2440

    putative shikimate 5-dehydrogenase
    SEED: Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)
    KEGG: shikimate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1627 conserved protein of unknown function no 0.46
    2 PP_3627 conserved protein of unknown function no 0.45
    3 PP_0540 conserved inner membrane protein 0.35 0.44
    4 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.16 0.44
    5 PP_2148 transcription-repair coupling factor 0.45 0.43
    6 PP_1774 conserved exported protein of unknown function no 0.43
    7 PP_1798 Outer membrane efflux protein no 0.43
    8 PP_5283 periplasmic dipeptide transport protein 0.60 0.41
    9 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.19 0.40
    10 PP_0405 conserved protein of unknown function 0.40 0.39
    11 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.39
    12 PP_1777 phosphomannomutase no 0.39
    13 PP_1803 UDP-sugar epimerase 0.57 0.38
    14 PP_3769 conserved exported protein of unknown function no 0.37
    15 PP_5114 putative adenine methyltransferase 0.30 0.37
    16 PP_1871 Protease HtpX 0.21 0.36
    17 PP_5279 conserved protein of unknown function no 0.36
    18 PP_5284 UPF0758 protein PP_5284 no 0.35
    19 PP_1355 Muropeptide permease AmpG 0.45 0.35
    20 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase no 0.35

    Or look for negative cofitness