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  • Top cofit genes for PP_3758 from Pseudomonas putida KT2440

    Response regulator/sensor histidine kinase
    SEED: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0498 conserved protein of unknown function no 0.26
    2 PP_1589 uridylyltransferase 0.53 0.25
    3 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.24
    4 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.38 0.24
    5 PP_4179 Chaperone protein HtpG 0.64 0.23
    6 PP_1382 putative porin-encoding gene no 0.23
    7 PP_0123 DNA polymerase I, 5 0.64 0.23
    8 PP_2223 conserved protein of unknown function 0.62 0.23
    9 PP_3759 Methylesterase, CheB-like 0.56 0.23
    10 PP_5338 aspartate ammonia-lyase 0.38 0.23
    11 PP_0002 probable chromosome partition protein 0.37 0.23
    12 PP_4546 ATP-dependent helicase HrpA no 0.23
    13 PP_1321 ClpXP protease specificity-enhancing factor no 0.22
    14 PP_0496 Sodium/alanine symporter no 0.22
    15 PP_2080 NAD-specific glutamate dehydrogenase no 0.22
    16 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.48 0.21
    17 PP_0214 4-aminobutyrate aminotransferase no 0.21
    18 PP_5177 spermidine/putrescine ABC transporter - permease subunit 0.36 0.21
    19 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.51 0.21
    20 PP_3427 Multidrug efflux RND outer membrane protein OprN no 0.21

    Or look for negative cofitness