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  • Top cofit genes for PP_3755 from Pseudomonas putida KT2440

    3-hydroxybutyryl-CoA dehydrogenase
    SEED: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
    KEGG: 3-hydroxybutyryl-CoA dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3754 Beta-ketothiolase BktB 0.28 0.70
    2 PP_3753 Transcriptional regulator, AraC family 0.43 0.66
    3 PP_2790 Sigma-54 dependent sensory box protein no 0.44
    4 PP_3554 Acyl-CoA dehydrogenase family protein no 0.41
    5 PP_2791 4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data) no 0.41
    6 PP_3756 TetR family transcriptional regulator 0.27 0.39
    7 PP_3553 AMP-binding domain protein no 0.39
    8 PP_2335 methylcitrate synthase 0.28 0.35
    9 PP_2794 Oxidoreductase, short chain dehydrogenase/reductase family no 0.35
    10 PP_2326 Universal stress protein no 0.34
    11 PP_2333 GntR family transcriptional regulator no 0.33
    12 PP_2217 enoyl-CoA hydratase 0.62 0.33
    13 PP_2334 2-methylisocitrate lyase no 0.32
    14 PP_2793 Acyl-CoA dehydrogenase family protein no 0.32
    15 PP_3286 DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA) no 0.29
    16 PP_4628 conserved protein of unknown function no 0.29
    17 PP_3552 Sensory box histidine kinase no 0.29
    18 PP_1021 DNA-binding transcriptional regulator no 0.24
    19 PP_1860 Organic hydroperoxide resistance transcriptional regulator 0.68 0.23
    20 PP_2433 conserved protein of unknown function no 0.23

    Or look for negative cofitness