Top cofit genes for PP_3753 from Pseudomonas putida KT2440

Transcriptional regulator, AraC family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3754		Beta-ketothiolase BktB	0.59	0.80
2	PP_3755		3-hydroxybutyryl-CoA dehydrogenase	0.43	0.66
3	PP_2790		Sigma-54 dependent sensory box protein	no	0.60
4	PP_2791		4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data)	no	0.57
5	PP_2333		GntR family transcriptional regulator	no	0.50
6	PP_2335		methylcitrate synthase	0.18	0.50
7	PP_2794		Oxidoreductase, short chain dehydrogenase/reductase family	no	0.48
8	PP_2334		2-methylisocitrate lyase	0.38	0.47
9	PP_3286		DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA)	no	0.40
10	PP_4628		conserved protein of unknown function	no	0.40
11	PP_2793		Acyl-CoA dehydrogenase family protein	no	0.39
12	PP_3756		TetR family transcriptional regulator	0.23	0.38
13	PP_3554		Acyl-CoA dehydrogenase family protein	no	0.34
14	PP_3925		conserved protein of unknown function	no	0.31
15	PP_3553		AMP-binding domain protein	no	0.31
16	PP_2337		aconitate isomerase	0.38	0.29
17	PP_2217		enoyl-CoA hydratase	no	0.29
18	PP_2336		aconitate hydratase 1	no	0.28
19	PP_4699		3-methyl-2-oxobutanoate hydroxymethyltransferase	0.31	0.27
20	PP_3122		acetoacetyl CoA-transferase (subunit A)	no	0.25

Or look for negative cofitness