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  • Top cofit genes for PP_3736 from Pseudomonas putida KT2440

    vanillate O-demethylase oxygenase subunit
    SEED: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
    KEGG: vanillate monooxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3737 vanillate O-demethylase oxidoreductase 0.75 0.94
    2 PP_1616 formaldehyde dehydrogenase, glutathione-dependent 0.59 0.66
    3 PP_4655 protocatechuate 3,4-dioxygenase alpha chain 0.29 0.63
    4 PP_4656 protocatechuate 3,4-dioxygenase beta chain 0.34 0.63
    5 PP_1379 3-carboxy-cis,cis-muconate cycloisomerase 0.35 0.60
    6 PP_1375 transcription regulatory protein (pca regulon) 0.34 0.58
    7 PP_1380 3-oxoadipate enol-lactonase 2 0.45 0.56
    8 PP_1377 beta-ketoadipyl-CoA thiolase 0.36 0.56
    9 PP_3952 3-oxoadipate CoA-transferase subunit A no 0.53
    10 PP_3951 3-oxoadipate CoA-transferase subunit A no 0.52
    11 PP_1615 Transcriptional regulator, LysR family 0.67 0.52
    12 PP_1713 Transcriptional regulator PcaQ no 0.52
    13 PP_1378 alpha-ketoglutarate permease 0.34 0.50
    14 PP_3622 vanillin dehydrogenase, iorB-like component (from data) no 0.46
    15 PP_1381 4-carboxymuconolactone decarboxylase 0.30 0.46
    16 PP_3623 vanillin dehydrogenase, cytochrome c component (from data) no 0.43
    17 PP_3830 Molybdenum import ATP-binding protein ModC no 0.43
    18 PP_3828 Molybdate-binding periplasmic protein 0.52 0.41
    19 PP_1292 Cyclic pyranopterin monophosphate synthase accessory protein 0.32 0.41
    20 PP_2123 molybdenum::molybdopterin ligase 0.32 0.38

    Or look for negative cofitness