Top cofit genes for PP_3731 from Pseudomonas putida KT2440

Transcriptional regulator, TetR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2335		methylcitrate synthase	no	0.35
2	PP_2433		conserved protein of unknown function	no	0.34
3	PP_4699		3-methyl-2-oxobutanoate hydroxymethyltransferase	0.29	0.33
4	PP_4130		NADH:ubiquinone oxidoreductase, membrane subunit M	no	0.33
5	PP_4131		NADH-quinone oxidoreductase subunit N	no	0.32
6	PP_1842		Glutamine amidotransferase, class I	no	0.32
7	PP_4120		NADH-quinone oxidoreductase subunit B	no	0.31
8	PP_2136		enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase	0.59	0.30
9	PP_4122		proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E	0.19	0.30
10	PP_0767		Transcriptional regulator, LuxR family	no	0.30
11	PP_2327		transcriptional dual regulator / CysB-O-acetyl-L-serine	no	0.29
12	PP_2868		Transcriptional regulator, Cro/CI family	0.78	0.29
13	PP_0356		malate synthase G	0.28	0.29
14	PP_5185		acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase	no	0.29
15	PP_3246		Beta-carotene hydroxylase	no	0.28
16	PP_4121		NADH-quinone oxidoreductase subunit C/D	no	0.28
17	PP_4116		isocitrate lyase	no	0.27
18	PP_2137		beta-ketoadipyl CoA thiolase, beta component	no	0.27
19	PP_1088		Argininosuccinate synthase	no	0.27
20	PP_2334		2-methylisocitrate lyase	no	0.27

Or look for negative cofitness