Top cofit genes for PP_3729 from Pseudomonas putida KT2440

Periplasmic amino acid-binding protein-related protein
SEED: FIG00956444: hypothetical protein
KEGG: polar amino acid transport system substrate-binding protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3989		DNA-cytosine methyltransferase	no	0.19
2	PP_3151		NAD+-dependent succinate semialdehyde dehydrogenase	no	0.18
3	PP_0382		5-aminopentanamidase	no	0.18
4	PP_1054		Type II secretion pathway protein XcpZ	no	0.18
5	PP_5594		conserved protein of unknown function	no	0.18
6	PP_5258		L-piperidine-6-carboxylate dehydrogenase	no	0.17
7	PP_4589		D-isomer specific 2-hydroxyacid dehydrogenase family protein	no	0.17
8	PP_4669		OmpA family protein	no	0.16
9	PP_3597		L-lysine and D-lysine ABC transporter, ATPase component (from data)	no	0.16
10	PP_3359		putative Hydroxycinnamic acid degradation regulator	no	0.16
11	PP_4482		Transcriptional regulator, AraC family	0.44	0.16
12	PP_4493		D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data)	no	0.16
13	PP_1008		RNA polymerase subunit sigma-24	no	0.16
14	PP_5260		2-oxoadipate decarboxylase/hydroxylase (2-hydroxyglutarate synthase) (from data)	no	0.15
15	PP_3249		putative oxidoreductase	no	0.15
16	PP_5504		conserved protein of unknown function	no	0.15
17	PP_3253		Carboxylate-amine ligase PP_3253	no	0.15
18	PP_2411		Major facilitator family transporter	no	0.15
19	PP_2439		peroxiredoxin, alkylhydroperoxide reductase - small subunit	no	0.15
20	PP_3763		putative CobF protein	no	0.15

Or look for negative cofitness