Top cofit genes for PP_3711 from Pseudomonas putida KT2440

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4799		putative Muramoyltetrapeptide carboxypeptidase	no	0.22
2	PP_5352		DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex	no	0.20
3	PP_4769		conserved protein of unknown function	no	0.20
4	PP_3751		putative Cyanate transporter	no	0.20
5	PP_1468		Tyrosine recombinase XerD	no	0.19
6	PP_0691		Glutamate 5-kinase	no	0.19
7	PP_3248		Dyp-type peroxidase family protein	no	0.19
8	PP_2981		putative cointegrate resolution protein S	no	0.19
9	PP_4004		DNA translocase FtsK	no	0.19
10	PP_1455		conserved protein of unknown function	no	0.19
11	PP_3735		ABC transporter ATP-binding protein	no	0.18
12	PP_3589		serine:H+ symport permease, threonine-insensitive	no	0.18
13	PP_5230		Tyrosine recombinase XerC	no	0.18
14	PP_2238		putative metallopeptidase	no	0.18
15	PP_1445		carbohydrate-selective porin	no	0.18
16	PP_0534		putative Transcriptional regulator PfeR	no	0.17
17	PP_2906		Sensor histidine kinase	no	0.17
18	PP_1629		Protein RecA	no	0.17
19	PP_5558		putative transcriptional xre family of phage origin	no	0.17
20	PP_0002		probable chromosome partition protein	no	0.16

Or look for negative cofitness