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Cofit
Protein
Homologs
Top cofit genes for PP_3611 from
Pseudomonas putida KT2440
conserved exported protein of unknown function
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_5275
putative regulator
no
0.16
2
PP
_1770
3-phosphoshikimate 1-carboxyvinyltransferase
no
0.16
3
PP
_1534
conserved protein of unknown function
no
0.15
4
PP
_2750
putative Branched-chain amino acid ABC transporter, permease protein
no
0.15
5
PP
_2072
Transcriptional regulator, AraC family
no
0.14
6
PP
_1655
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
0.26
0.14
7
PP
_4312
conserved exported protein of unknown function
no
0.14
8
PP
_0656
putative Amino acid ABC transporter, permease protein
no
0.14
9
PP
_3370
2-carboxybenzaldehyde reductase
no
0.14
10
PP
_4246
Periplasmic binding protein
no
0.14
11
PP
_0561
thiol/disulfide interchange protein 1
no
0.14
12
PP
_2970
conserved exported protein of unknown function
no
0.14
13
PP
_2070
Transcriptional regulator, AraC family
0.24
0.14
14
PP
_0377
coenzyme PQQ synthesis protein D
no
0.14
15
PP
_0532
conserved exported protein of unknown function
no
0.13
16
PP
_2025
Exonuclease SbcD
no
0.13
17
PP
_1072
Leucine-rich repeat domain protein
no
0.13
18
PP
_4660
Transcriptional regulator, LysR family
no
0.13
19
PP
_4038
Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2)
(from data)
no
0.13
20
PP
_2514
4-carboxy-4-hydroxy-2-oxoadipic acid aldolase
no
0.13
Or look for
negative cofitness