Top cofit genes for PP_3608 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3620		cofactor of beta-methylthiolation of ribosomal protein S12	0.36	0.18
2	PP_2554		putative 3-dehydroshikimate dehydratase	no	0.15
3	PP_5283		periplasmic dipeptide transport protein	no	0.15
4	PP_1075		glycerol kinase	no	0.15
5	PP_4039		transcriptional regulator, TetR family	no	0.15
6	PP_2406		putative quinate/shikimate dehydrogenase	no	0.15
7	PP_5563		conserved membrane protein of unknown function	no	0.15
8	PP_4217		outer membrane ferripyoverdine receptor FpvA, TonB-dependent	no	0.15
9	PP_3018		conserved protein of unknown function	no	0.15
10	PP_3589		serine:H+ symport permease, threonine-insensitive	no	0.15
11	PP_2434		conserved protein of unknown function	no	0.15
12	PP_5068		conserved protein of unknown function, UPF0061 family	0.59	0.14
13	PP_0534		putative Transcriptional regulator PfeR	0.33	0.14
14	PP_5504		conserved protein of unknown function	no	0.14
15	PP_5101		coproporphyrinogen/heterocyclic compound oxidase (aerobic)	0.15	0.14
16	PP_1698		Major facilitator family transporter	no	0.14
17	PP_2423		Fe(2+)/alpha-ketoglutarate-dependent dioxygenase	0.13	0.14
18	PP_3768		putative shikimate 5-dehydrogenase	no	0.14
19	PP_4276		Chromosome partition protein Smc	0.38	0.14
20	PP_3763		putative CobF protein	0.15	0.14

Or look for negative cofitness