Top cofit genes for PP_3592 from Pseudomonas putida KT2440

Transcriptional regulator, RpiR family
SEED: Transcriptional regulators

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3593		L-lysine and D-lysine ABC transporter, substrate-binding component (from data)	no	0.89
2	PP_3595		L-lysine and D-lysine ABC transporter, permease component 2 (from data)	no	0.87
3	PP_3594		L-lysine and D-lysine ABC transporter, permease component 1 (from data)	no	0.86
4	PP_5257		L-pipecolate oxidase	no	0.83
5	PP_3596		D-lysine oxidase	0.45	0.77
6	PP_5260		2-oxoadipate decarboxylase/hydroxylase (2-hydroxyglutarate synthase) (from data)	0.26	0.77
7	PP_4493		D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data)	no	0.76
8	PP_3591		Delta 1-piperideine-2-carboxylate reductase	no	0.75
9	PP_5258		L-piperidine-6-carboxylate dehydrogenase	no	0.73
10	PP_3597		L-lysine and D-lysine ABC transporter, ATPase component (from data)	no	0.72
11	PP_0382		5-aminopentanamidase	no	0.66
12	PP_0383		Lysine 2-monooxygenase	no	0.66
13	PP_0384		Transcriptional regulator, AsnC family	no	0.61
14	PP_4108		2-aminoadipate transaminase (EC 2.6.1.39) (from data)	no	0.46
15	PP_2910		L-2-hydroxyglutarate oxidase	no	0.41
16	PP_4494		putative LysR-type transcriptional activator protein	no	0.38
17	PP_0213		succinate-semialdehyde dehydrogenase (NADP+)	no	0.34
18	PP_1297		putative amino-acid ABC transporter-binding protein YhdW	0.60	0.27
19	PP_0155		pyridine nucleotide transhydrogenase, beta subunit	0.64	0.26
20	PP_0774		Phosphate acetyltransferase	0.35	0.25

Or look for negative cofitness