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  • Top cofit genes for PP_3590 from Pseudomonas putida KT2440

    aromatic-amino-acid transaminase (EC 2.6.1.57) (from data)
    Original annotation: D-lysine aminotransferase
    SEED: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)
    KEGG: aromatic-amino-acid transaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1377 beta-ketoadipyl-CoA thiolase 0.37 0.54
    2 PP_3952 3-oxoadipate CoA-transferase subunit A no 0.53
    3 PP_3951 3-oxoadipate CoA-transferase subunit A no 0.53
    4 PP_1375 transcription regulatory protein (pca regulon) 0.44 0.46
    5 PP_1380 3-oxoadipate enol-lactonase 2 no 0.45
    6 PP_1378 alpha-ketoglutarate permease no 0.43
    7 PP_4655 protocatechuate 3,4-dioxygenase alpha chain no 0.42
    8 PP_1379 3-carboxy-cis,cis-muconate cycloisomerase no 0.42
    9 PP_3433 4-hydroxyphenylpyruvate dioxygenase 0.44 0.41
    10 PP_3527 Transcriptional regulator, TetR family 0.41 0.41
    11 PP_4656 protocatechuate 3,4-dioxygenase beta chain 0.21 0.40
    12 PP_1381 4-carboxymuconolactone decarboxylase no 0.40
    13 PP_1713 Transcriptional regulator PcaQ no 0.40
    14 PP_5035 Histidine utilization repressor 0.49 0.40
    15 PP_3737 vanillate O-demethylase oxidoreductase no 0.37
    16 PP_3736 vanillate O-demethylase oxygenase subunit no 0.37
    17 PP_1418 putative Tricarboxylate transport protein TctC 0.66 0.34
    18 PP_4621 Homogentisate 1,2-dioxygenase 0.43 0.34
    19 PP_4922 Phosphomethylpyrimidine synthase 0.49 0.34
    20 PP_1420 Transcriptional regulatory protein tctD no 0.34

    Or look for negative cofitness