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  • Top cofit genes for PP_3577 from Pseudomonas putida KT2440

    RNA polymerase, sigma 19 factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4995 putative protein possibly involved in the control of exopolysaccharide production 0.35 0.19
    2 PP_1707 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.19
    3 PP_2138 conserved protein of unknown function no 0.17
    4 PP_3461 quinohemoprotein amine dehydrogenase modification protein no 0.17
    5 PP_2948 Transcriptional regulator, GntR family no 0.15
    6 PP_2954 conserved protein of unknown function no 0.15
    7 PP_0169 Dioxygenase, TauD/TfdA family no 0.15
    8 PP_3232 Acetyltransferase, GNAT family no 0.15
    9 PP_1657 modified nucleoside triphosphate pyrophosphohydrolase no 0.15
    10 PP_3910 conserved protein of unknown function no 0.15
    11 PP_2947 putative Transcriptional regulator MvaT, P16 subunit no 0.15
    12 PP_2807 conserved protein of unknown function no 0.15
    13 PP_0307 conserved exported protein of unknown function no 0.14
    14 PP_5686 protein of unknown function no 0.14
    15 PP_3749 conserved protein of unknown function no 0.14
    16 PP_5399 conserved protein of unknown function no 0.14
    17 PP_0728 conserved protein of unknown function no 0.14
    18 PP_1393 putative transcriptional regulator no 0.14
    19 PP_4559 peptide deformylase no 0.14
    20 PP_1762 conserved protein of unknown function no 0.14

    Or look for negative cofitness