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  • Top cofit genes for PP_3569 from Pseudomonas putida KT2440

    quinate dehydrogenase (quinone)
    SEED: Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.99.25)
    KEGG: quinate dehydrogenase (quinone)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4964 D-erythrose 4-phosphate dehydrogenase no 0.28
    2 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L no 0.23
    3 PP_4880 exoribonuclease R no 0.21
    4 PP_4131 NADH-quinone oxidoreductase subunit N 0.38 0.21
    5 PP_4124 NADH-quinone oxidoreductase subunit G 0.61 0.20
    6 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.34 0.20
    7 PP_1734 Probable septum site-determining protein MinC no 0.19
    8 PP_3019 Carbon-nitrogen hydrolase family protein no 0.19
    9 PP_1994 tRNA pseudouridine (38-40)synthase no 0.19
    10 PP_4542 putative ABC transporter, ATP-binding protein/permease protein no 0.18
    11 PP_5527 phage transcriptional regulator no 0.18
    12 PP_2378 Fe/S biogenesis protein NfuA 0.42 0.18
    13 PP_1529 Probable cysteine desulfurase no 0.18
    14 PP_5639 conserved exported protein of unknown function no 0.18
    15 PP_3248 Dyp-type peroxidase family protein no 0.18
    16 PP_3719 Putrescine-binding periplasmic protein no 0.18
    17 PP_4612 putative FecR protein no 0.18
    18 PP_4120 NADH-quinone oxidoreductase subunit B no 0.17
    19 PP_1125 putative Helicase 0.56 0.17
    20 PP_1353 conserved membrane protein of unknown function no 0.17

    Or look for negative cofitness