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Cofit
Protein
Homologs
Top cofit genes for PP_3565 from
Pseudomonas putida KT2440
Transporter, LysE family
SEED: transporter, LysE family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1655
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
no
0.25
2
PP
_1656
ATP:GTP 3'-pyrophosphotransferase
no
0.21
3
PP
_4469
ribose 1,5-bisphosphate phosphokinase
no
0.20
4
PP
_2023
Glutathione S-transferase family protein
0.75
0.19
5
PP
_1415
putative membrane associated enzyme subunit
0.56
0.19
6
PP
_3423
Type II secretion pathway protein XcpT
no
0.19
7
PP
_4246
Periplasmic binding protein
no
0.18
8
PP
_5020
putative methyl-accepting chemotaxis protein
0.41
0.18
9
PP
_1552
putative Phage replication protein
no
0.17
10
PP
_3892
conserved protein of unknown function
no
0.17
11
PP
_5227
diaminopimelate decarboxylase
no
0.17
12
PP
_4312
conserved exported protein of unknown function
no
0.17
13
PP
_0049
conserved protein of unknown function
no
0.16
14
PP
_4284
putative Transporter
no
0.16
15
PP
_5112
putative processin peptidase
0.29
0.16
16
PP
_0579
conserved protein of unknown function
no
0.16
17
PP
_4885
conserved protein of unknown function
no
0.16
18
PP
_2157
Sensor histidine kinase
no
0.16
19
PP
_0275
conserved protein of unknown function
no
0.16
20
PP
_0669
Outer membrane ferric siderophore receptor
no
0.16
Or look for
negative cofitness