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  • Top cofit genes for PP_3565 from Pseudomonas putida KT2440

    Transporter, LysE family
    SEED: transporter, LysE family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.25
    2 PP_1656 ATP:GTP 3'-pyrophosphotransferase no 0.21
    3 PP_4469 ribose 1,5-bisphosphate phosphokinase no 0.20
    4 PP_2023 Glutathione S-transferase family protein 0.75 0.19
    5 PP_1415 putative membrane associated enzyme subunit 0.56 0.19
    6 PP_3423 Type II secretion pathway protein XcpT no 0.19
    7 PP_4246 Periplasmic binding protein no 0.18
    8 PP_5020 putative methyl-accepting chemotaxis protein 0.41 0.18
    9 PP_1552 putative Phage replication protein no 0.17
    10 PP_3892 conserved protein of unknown function no 0.17
    11 PP_5227 diaminopimelate decarboxylase no 0.17
    12 PP_4312 conserved exported protein of unknown function no 0.17
    13 PP_0049 conserved protein of unknown function no 0.16
    14 PP_4284 putative Transporter no 0.16
    15 PP_5112 putative processin peptidase 0.29 0.16
    16 PP_0579 conserved protein of unknown function no 0.16
    17 PP_4885 conserved protein of unknown function no 0.16
    18 PP_2157 Sensor histidine kinase no 0.16
    19 PP_0275 conserved protein of unknown function no 0.16
    20 PP_0669 Outer membrane ferric siderophore receptor no 0.16

    Or look for negative cofitness