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  • Top cofit genes for PP_3562 from Pseudomonas putida KT2440

    conserved exported protein of unknown function
    SEED: Cell wall hydrolyses involved in spore germination

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0257 protein sulfur transferase no 0.16
    2 PP_3051 Pyocin R2_PP, tail spike protein no 0.15
    3 PP_5351 glucose-6-phosphate 1-dehydrogenase no 0.14
    4 PP_5196 putative iron(III)|iron ABC transporter, periplasmic iron-binding protein no 0.14
    5 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase no 0.14
    6 PP_3087 putative excinuclease ABC subunit A no 0.14
    7 PP_3620 cofactor of beta-methylthiolation of ribosomal protein S12 no 0.13
    8 PP_0902 integral membrane sensor signal transduction histidine kinase no 0.13
    9 PP_1853 Transcriptional regulator, LysR family no 0.13
    10 PP_3084 putative Outer membrane ferric siderophore receptor no 0.13
    11 PP_4525 Transcriptional regulator, LysR family no 0.13
    12 PP_2720 conserved protein of unknown function no 0.13
    13 PP_5594 conserved protein of unknown function no 0.13
    14 PP_0618 Branched-chain amino acid ABC transporter, permease protein no 0.13
    15 PP_4499 putative maturation enzyme no 0.13
    16 PP_5125 Formamidopyrimidine-DNA glycosylase no 0.12
    17 PP_0718 Sulfate transporter no 0.12
    18 PP_2906 Sensor histidine kinase no 0.12
    19 PP_5126 conserved protein of unknown function containing an HDOD domain 0.25 0.12
    20 PP_0739 deoxyribodipyrimidine photolyase no 0.12

    Or look for negative cofitness