Top cofit genes for PP_3560 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3833		Response regulator	no	0.18
2	PP_3000		MaoC domain protein	no	0.18
3	PP_3118		DNA linked enzyme involved in DNA repair	no	0.18
4	PP_4066		methylglutaconyl-CoA hydratase	no	0.17
5	PP_3355		Beta-ketothiolase	no	0.17
6	PP_1021		DNA-binding transcriptional regulator	no	0.16
7	PP_5733		putative metal-binding protein	no	0.16
8	PP_4298		hydroxypyruvate isomerase	no	0.16
9	PP_2307		conserved protein of unknown function	no	0.16
10	PP_0488		putative NADP-dependent dehydrogenase HI_1430	no	0.16
11	PP_2914		osmosensory proline/betaine/H+ permease	no	0.16
12	PP_1319		Ubiquinol--cytochrome c reductase, cytochrome c1	no	0.15
13	PP_3903		conserved protein of unknown function	no	0.15
14	PP_4392		chemotaxis protein methyltransferase	no	0.15
15	PP_0665		putative glyceraldehyde-3-phosphate dehydrogenase	no	0.15
16	PP_3109		conserved protein of unknown function	no	0.15
17	PP_1763		putative oxidoreductase	0.27	0.15
18	PP_3663		GGDEF domain protein	no	0.15
19	PP_5738		conserved protein of unknown function	no	0.15
20	PP_3529		dimethyl-sulfide monooxygenase	no	0.15

Or look for negative cofitness