Top cofit genes for PP_3552 from Pseudomonas putida KT2440

Sensory box histidine kinase
SEED: Sensory box histidine kinase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3553		AMP-binding domain protein	no	0.65
2	PP_3554		Acyl-CoA dehydrogenase family protein	no	0.60
3	PP_3756		TetR family transcriptional regulator	no	0.32
4	PP_3754		Beta-ketothiolase BktB	no	0.29
5	PP_3755		3-hydroxybutyryl-CoA dehydrogenase	no	0.29
6	PP_3551		DNA-binding response regulator, LuxR family	0.53	0.27
7	PP_3753		Transcriptional regulator, AraC family	no	0.22
8	PP_4488		conserved exported protein of unknown function	no	0.19
9	PP_1716		Transcriptional regulator, Cro/CI family	no	0.18
10	PP_2217		enoyl-CoA hydratase	no	0.16
11	PP_5085		malic enzyme B	no	0.15
12	PP_1262		LysR family transcriptional regulator	no	0.15
13	PP_0893		ThiJ/PfpI family protein	no	0.15
14	PP_2351		propionyl-CoA synthetase	no	0.14
15	PP_5304		putative Lipoprotein	no	0.14
16	PP_5217		Polyphosphate kinase	no	0.13
17	PP_0841		DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR	no	0.13
18	PP_1826		Hydrolase, isochorismatase family	no	0.12
19	PP_4419		transposase	no	0.12
20	PP_0048		conserved protein of unknown function	no	0.12

Or look for negative cofitness