Top cofit genes for PP_3551 from Pseudomonas putida KT2440

DNA-binding response regulator, LuxR family
SEED: DNA-binding response regulator, LuxR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3552		Sensory box histidine kinase	no	0.27
2	PP_5580		protein of unknown function	no	0.24
3	PP_4162		conserved membrane protein of unknown function	0.41	0.23
4	PP_1968		TetR family transcriptional regulator	no	0.20
5	PP_4836		conserved exported protein of unknown function	no	0.20
6	PP_3735		ABC transporter ATP-binding protein	no	0.20
7	PP_2331		conserved membrane protein of unknown function	no	0.20
8	PP_2567		Hydrolase, alpha/beta fold family	no	0.20
9	PP_3304		Multidrug resistance transporter, Bcr/CflA family	no	0.19
10	PP_0281		Amino acid ABC transporter, permease protein	no	0.19
11	PP_2330		conserved protein of unknown function	no	0.19
12	PP_5229		conserved protein of unknown function	no	0.19
13	PP_2907		DNA-binding response regulator	no	0.19
14	PP_0645		protein of unknown function	no	0.18
15	PP_2437		putative Acyl-CoA dehydrogenase	no	0.18
16	PP_2362		putative usher protein	no	0.18
17	PP_2741		conserved membrane protein of unknown function	no	0.18
18	PP_2434		conserved protein of unknown function	no	0.18
19	PP_4946		sodium/L-proline transporter	0.18	0.18
20	PP_1242		conserved protein of unknown function	no	0.17

Or look for negative cofitness