Top cofit genes for PP_3549 from Pseudomonas putida KT2440

multidrug efflux transport system - membrane fusion protein
SEED: Membrane fusion component of tripartite multidrug resistance system
KEGG: multidrug resistance protein A

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2573		conserved protein of unknown function	no	0.21
2	PP_4693		RNA polymerase-binding transcription factor DksA	0.33	0.18
3	PP_0093		putative zinc protease protein	no	0.18
4	PP_5714		conserved protein of unknown function	no	0.18
5	PP_3721		arginine:pyruvate transaminase AruH (EC 2.6.1.84) (from data)	0.68	0.18
6	PP_1781		putative O-acyltransferase	no	0.17
7	PP_3255		non-homologous end joining protein	0.84	0.17
8	PP_0080		conserved protein of unknown function	no	0.16
9	PP_3208		Oxidoreductase, Pdr/VanB family	no	0.16
10	PP_1734		Probable septum site-determining protein MinC	0.40	0.16
11	PP_0393		putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	0.33	0.16
12	PP_3026		putative Phage recombinase	no	0.16
13	PP_4804		RlpA-like lipoprotein	0.36	0.16
14	PP_3932		Diguanylate cyclase	0.26	0.16
15	PP_2638		putative Cellulose synthase operon C protein	0.53	0.15
16	PP_3036		conserved protein of unknown function	no	0.15
17	PP_5310		junction-specific ATP-dependent DNA helicase	0.74	0.15
18	PP_0572		peptidoglycan glycosyltransferase	no	0.15
19	PP_2800		putative Diaminobutyrate-2-oxoglutarate transaminase	no	0.15
20	PP_2231		putative permease of the drug/metabolite transporter (DMT) superfamily	no	0.14

Or look for negative cofitness