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  • Top cofit genes for PP_3544 from Pseudomonas putida KT2440

    Transcriptional regulator, GntR family
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4210 pyoverdine efflux carrier and ATP binding protein 0.62 0.25
    2 PP_3105 conserved membrane protein of unknown function no 0.24
    3 PP_3619 conserved protein of unknown function no 0.22
    4 PP_3639 Alkylhydroperoxidase AhpD domain protein no 0.21
    5 PP_1448 conserved membrane protein of unknown function 0.37 0.21
    6 PP_4979 putative Periplasmic binding protein 0.36 0.20
    7 PP_2352 conserved protein of unknown function no 0.19
    8 PP_1929 arsenite/antimonite transporter 0.38 0.19
    9 PP_5717 conserved protein of unknown function no 0.18
    10 PP_0937 endoribonuclease G (RNAse G) 0.71 0.18
    11 PP_4211 outer membrane pyoverdine efflux protein no 0.18
    12 PP_4824 Sensor histidine kinase/response regulator no 0.18
    13 PP_4130 NADH:ubiquinone oxidoreductase, membrane subunit M 0.67 0.17
    14 PP_3316 putative Chaperone-associated ATPase no 0.17
    15 PP_4980 ATP-dependent RNA helicase no 0.17
    16 PP_4122 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E 0.54 0.17
    17 PP_3800 conserved protein of unknown function no 0.17
    18 PP_4933 conserved protein of unknown function 0.63 0.17
    19 PP_3108 Rhs-related protein no 0.16
    20 PP_3346 Nickel transporter ATP-binding protein 0.51 0.16

    Or look for negative cofitness