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  • Top cofit genes for PP_3537 from Pseudomonas putida KT2440

    p-hydroxybenzoate hydroxylase
    SEED: P-hydroxybenzoate hydroxylase (EC 1.14.13.2)
    KEGG: p-hydroxybenzoate 3-monooxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3538 transcriptional regulator 0.97 0.84
    2 PP_3356 p-coumarate CoA-ligase (EC 6.2.1.12) (from data) 0.81 0.55
    3 PP_3357 p-hydroxybenzaldehyde dehydrogenase vdh (EC 1.2.1.64) (from data) 0.79 0.53
    4 PP_3358 hydroxycinnamoyl-CoA hydratase-lyase (EC 4.1.2.61) (from data) 0.79 0.49
    5 PP_1379 3-carboxy-cis,cis-muconate cycloisomerase 0.87 0.48
    6 PP_1377 beta-ketoadipyl-CoA thiolase 0.85 0.47
    7 PP_3952 3-oxoadipate CoA-transferase subunit A 0.92 0.46
    8 PP_3951 3-oxoadipate CoA-transferase subunit A 0.89 0.44
    9 PP_4655 protocatechuate 3,4-dioxygenase alpha chain 0.96 0.43
    10 PP_1380 3-oxoadipate enol-lactonase 2 0.88 0.43
    11 PP_4656 protocatechuate 3,4-dioxygenase beta chain 0.97 0.42
    12 PP_1378 alpha-ketoglutarate permease 0.82 0.42
    13 PP_1375 transcription regulatory protein (pca regulon) 0.87 0.41
    14 PP_1713 Transcriptional regulator PcaQ 0.97 0.32
    15 PP_1381 4-carboxymuconolactone decarboxylase 0.92 0.28
    16 PP_0428 aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase 0.58 0.22
    17 PP_0096 oligopeptidase A no 0.20
    18 PP_3590 aromatic-amino-acid transaminase (EC 2.6.1.57) (from data) no 0.19
    19 PP_2388 Transporter, LysE family no 0.19
    20 PP_2354 Sensory box histidine kinase/response regulator no 0.19

    Or look for negative cofitness