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  • Top cofit genes for PP_3533 from Pseudomonas putida KT2440

    putative ornithine cyclodeaminase
    SEED: Ornithine cyclodeaminase (EC 4.3.1.12)
    KEGG: ornithine cyclodeaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.26 0.18
    2 PP_2144 Transcriptional regulator, TetR family no 0.18
    3 PP_2284 Tail tubular protein B no 0.18
    4 PP_2742 conserved protein of unknown function no 0.18
    5 PP_1778 Lipopolysaccharide ABC export system, permease protein no 0.17
    6 PP_1779 Lipopolysaccharide ABC export system, ATP-binding protein no 0.17
    7 PP_4261 cation-transporting P-type ATPase no 0.17
    8 PP_2712 conserved exported protein of unknown function no 0.17
    9 PP_0135 conserved exported protein of unknown function no 0.17
    10 PP_4726 Chaperone protein DnaJ 0.38 0.17
    11 PP_4181 conserved protein of unknown function no 0.17
    12 PP_0397 protein kinase no 0.16
    13 PP_0396 conserved protein of unknown function no 0.16
    14 PP_0131 putative membrane-anchored phosphodiesterase no 0.16
    15 PP_4375 flagellar chaperone, inhibits premature FliC assembly no 0.16
    16 PP_4947 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase 0.65 0.16
    17 PP_3695 conserved protein of unknown function no 0.16
    18 PP_0172 ABC transporter, permease protein 0.35 0.16
    19 PP_4942 conserved protein of unknown function no 0.16
    20 PP_4941 conserved exported protein of unknown function no 0.16

    Or look for negative cofitness