Top cofit genes for PP_3516 from Pseudomonas putida KT2440

Transcriptional regulator, AraC family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3514		5-oxoprolinase B	no	0.62
2	PP_3515		5-oxoprolinase A	no	0.57
3	PP_4398		Major facilitator family transporter	no	0.23
4	PP_4422		succinate-semialdehyde dehydrogenase (NADP+)	no	0.22
5	PP_5268		DNA-binding transcriptional repressor PuuR-putrescine	no	0.19
6	PP_3776		putative permease (RarD protein)	no	0.16
7	PP_0430		conserved protein of unknown function	no	0.16
8	PP_2884		XRE family transcriptional regulator	no	0.13
9	PP_4480		arginine N-succinyltransferase, subunit alpha	no	0.13
10	PP_0716		HlyD family secretion protein	0.51	0.13
11	PP_0654		putative malate dehydrogenase	no	0.13
12	PP_2181		Transcriptional regulator, Cro/CI family	no	0.13
13	PP_0614		putative N-carbamoyl-beta-alanine amidohydrolase/allantoine amidohydrolase 1	no	0.12
14	PP_4289		conserved membrane protein of unknown function	no	0.12
15	PP_5048		two-component system DNA-binding transcriptional dual regulator GlnL/GlnG	0.50	0.12
16	PP_5203		5-formyltetrahydrofolate cyclo-ligase	0.29	0.12
17	PP_5047		two-component system sensory histidine kinase/phosphatase GlnL/GlnG	0.32	0.12
18	PP_5690		conserved protein of unknown function	no	0.12
19	PP_2636		cellulose synthase and translocator subunit	no	0.12
20	PP_1450		putative Activation/secretion protein, TPS family	0.24	0.12

Or look for negative cofitness