Top cofit genes for PP_3513 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: LysR-family transcriptional regulator STM3020

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3844		putative D-aminopeptidase	0.27	0.20
2	PP_0570		lipoprotein of unknown function	0.13	0.20
3	PP_3182		GGDEF domain protein	no	0.20
4	PP_4281		guanine deaminase	no	0.19
5	PP_0160		putative ferrioxamine receptor	no	0.19
6	PP_4785		conserved exported protein of unknown function	no	0.19
7	PP_4816		conserved protein of unknown function	no	0.19
8	PP_3784		conserved protein of unknown function	no	0.19
9	PP_5639		conserved exported protein of unknown function	no	0.19
10	PP_1898		MotA/TolQ/ExbB proton channel family protein	no	0.18
11	PP_3297		conserved protein of unknown function	no	0.18
12	PP_4096		conserved exported protein of unknown function	no	0.18
13	PP_0566		translation-related factor	no	0.17
14	PP_2267		putative Phage single-stranded DNA-binding protein	no	0.17
15	PP_4647		transcriptional regulator, LuxR family	0.64	0.17
16	PP_2486		NADH-dependent flavin oxidoreductase, Oye family	0.26	0.17
17	PP_2175		putative 3-oxoacyl-(Acyl-carrier-protein) reductase	no	0.17
18	PP_4994		conserved protein of unknown function	no	0.17
19	PP_0572		peptidoglycan glycosyltransferase	no	0.17
20	PP_2582		putative Heme oxygenase	no	0.16

Or look for negative cofitness