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  • Top cofit genes for PP_3504 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: FIG00953739: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3831 conserved protein of unknown function no 0.26
    2 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 0.23
    3 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase no 0.22
    4 PP_0680 ATP-dependent protease-like protein 0.30 0.21
    5 PP_4171 conserved exported protein of unknown function 0.38 0.21
    6 PP_1656 ATP:GTP 3'-pyrophosphotransferase no 0.20
    7 PP_4895 tRNA dimethylallyltransferase no 0.20
    8 PP_5444 protein of unknown function no 0.19
    9 PP_2245 Transcriptional regulator, Cro/CI family no 0.19
    10 PP_2146 helicase SNF2/RAD54 family no 0.19
    11 PP_0340 Glutamate-ammonia-ligase adenylyltransferase no 0.19
    12 PP_1113 Pyridoxal-phosphate dependent enzyme family protein no 0.18
    13 PP_1650 Sensor protein GacS 0.32 0.18
    14 PP_1871 Protease HtpX 0.56 0.18
    15 PP_3652 Transporter, LysE family no 0.18
    16 PP_t49 tRNA-Met no 0.18
    17 PP_2211 Transcriptional regulator, AraC family no 0.18
    18 PP_2573 conserved protein of unknown function no 0.17
    19 PP_0725 conserved hypothetical TPR repeat protein no 0.17
    20 PP_4099 two-componenent system BarA/UvrY - regulatory subunit 0.32 0.17

    Or look for negative cofitness