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  • Top cofit genes for PP_3483 from Pseudomonas putida KT2440

    putative Type II secretion system protein
    SEED: Predicted secretion system X protein GspE-like
    KEGG: general secretion pathway protein E

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_t11 tRNA-Lys no 0.22
    2 PP_3166 catechol 1,2-dioxygenase no 0.19
    3 PP_4177 conserved protein of unknown function no 0.19
    4 PP_3819 glutathione reductase (NADPH) no 0.19
    5 PP_4004 DNA translocase FtsK no 0.18
    6 PP_1215 Crossover junction endodeoxyribonuclease RuvC no 0.18
    7 PP_0856 conserved lipoprotein of unknown function 0.72 0.18
    8 PP_4836 conserved exported protein of unknown function no 0.18
    9 PP_4516 ATP-dependent DNA 3 no 0.18
    10 PP_0063 putative Lipid A biosynthesis lauroyl acyltransferase no 0.17
    11 PP_0002 probable chromosome partition protein no 0.17
    12 PP_4721 conserved membrane protein of unknown function 0.29 0.17
    13 PP_1187 sensor protein no 0.17
    14 PP_2934 conserved exported protein of unknown function 0.72 0.17
    15 PP_5103 tRNA (guanine-N(7)-)-methyltransferase 0.48 0.17
    16 PP_0747 Hypoxanthine-guanine phosphoribosyltransferase no 0.17
    17 PP_1038 conserved protein of unknown function no 0.17
    18 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) no 0.16
    19 PP_4265 DNA-binding transcriptional dual regulator no 0.16
    20 PP_2223 conserved protein of unknown function no 0.16

    Or look for negative cofitness