Top cofit genes for PP_3478 from Pseudomonas putida KT2440

putative Secretion protein
SEED: Predicted secretion system X protein GspD-like
KEGG: general secretion pathway protein D

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_5057		Peptidase, M23/M37 family	no	0.16
2	PP_3337		conserved membrane protein of unknown function	no	0.15
3	PP_2879		conserved exported protein of unknown function	no	0.13
4	PP_4999		dihydroorotase-like protein	no	0.13
5	PP_2569		Metabolite MFS transporter, MHS family	no	0.13
6	PP_0906		putative Multidrug efflux RND transporter	no	0.13
7	PP_5109		membrane component of the ABC transporter FtsEX involved in cellular division	no	0.13
8	PP_0188		putative Uroporphyrin-III C-methyltransferase	no	0.13
9	PP_1048		putative protein secretion protein for export	no	0.12
10	PP_3613		L-sorbosone dehydrogenase	no	0.12
11	PP_4951		Drug resistance transporter, EmrB/QacA family	no	0.12
12	PP_3049		conserved protein of unknown function	no	0.12
13	PP_4220		non-ribosomal peptide synthetase (subunit of ferribactin synthase)	no	0.12
14	PP_3923		Phosphoglycerate mutase	no	0.12
15	PP_4311		putative D-amino acid dehydrogenase 2 small subunit	no	0.12
16	PP_5572		protein of unknown function	no	0.12
17	PP_4910		conserved protein of unknown function	no	0.12
18	PP_0924		conserved protein of unknown function	no	0.12
19	PP_4724		Carbamoyl-phosphate synthase small chain	no	0.12
20	PP_0227		periplasmic cystine-binding protein	0.70	0.11

Or look for negative cofitness