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  • Top cofit genes for PP_3474 from Pseudomonas putida KT2440

    putative Curli fiber protein CsgE
    SEED: Curli production assembly/transport component CsgE
    KEGG: curli production assembly/transport component CsgE

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1385 Probable efflux pump membrane transporter TtgB no 0.67
    2 PP_1386 Probable efflux pump periplasmic linker TtgA no 0.66
    3 PP_1384 Probable efflux pump outer membrane protein TtgC 0.46 0.65
    4 PP_0961 toluene tolerance protein no 0.50
    5 PP_2163 VacJ lipoprotein no 0.49
    6 PP_1232 conserved exported protein of unknown function no 0.48
    7 PP_1941 conserved protein of unknown function no 0.45
    8 PP_0960 phospholipid ABC transporter binding protein no 0.43
    9 PP_0958 phospholipid ABC transporter ATP-binding subunit no 0.41
    10 PP_2436 Transcriptional regulator, LysR family no 0.41
    11 PP_3300 Transcriptional regulator, tetR family no 0.41
    12 PP_0962 toluene-tolerance protein no 0.37
    13 PP_3925 conserved protein of unknown function no 0.37
    14 PP_3154 lipid A 3-O-deacylase no 0.37
    15 PP_4937 toluene tolerance protein no 0.35
    16 PP_4948 Acyl-CoA dehydrogenase family protein no 0.35
    17 PP_0346 putative Heptose kinase WapQ no 0.33
    18 PP_0368 putative Acyl-CoA dehydrogenase no 0.32
    19 PP_0959 phospholipid ABC transporter no 0.32
    20 PP_3473 curli secretion and assembly outer membrane associated component 0.46 0.32

    Or look for negative cofitness