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  • Top cofit genes for PP_3453 from Pseudomonas putida KT2440

    putative Sensor protein RstB
    SEED: Sensory histidine kinase QseC
    KEGG: two-component system, OmpR family, sensor kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2348 Sensor histidine kinase no 0.39
    2 PP_2714 Sensor histidine kinase no 0.30
    3 PP_3376 putative phosphonate dehydrogenase no 0.30
    4 PP_4882 Iron ABC transporter, permease protein no 0.29
    5 PP_5327 putative phosphate ABC transporter, permease subunit 0.63 0.28
    6 PP_0482 bacterioferritin 0.25 0.27
    7 PP_3454 putative transcriptional regulatory protein 0.77 0.26
    8 PP_4838 Outer membrane copper receptor OprC no 0.26
    9 PP_0506 putative ABC efflux transporter, permease protein no 0.26
    10 PP_4505 Sensor histidine kinase 0.21 0.26
    11 PP_4060 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 0.19 0.26
    12 PP_4881 putative Iron ABC transporter, periplasmic iron-binding protein no 0.25
    13 PP_0910 conserved exported protein of unknown function no 0.25
    14 PP_4922 Phosphomethylpyrimidine synthase 0.55 0.25
    15 PP_0261 adenosine-3'(2'),5'-bisphosphate nucleotidase 0.62 0.24
    16 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily 0.45 0.24
    17 PP_1082 bacterioferritin no 0.23
    18 PP_1083 (2Fe-2S)-binding protein no 0.23
    19 PP_1385 Probable efflux pump membrane transporter TtgB 0.40 0.23
    20 PP_3474 putative Curli fiber protein CsgE no 0.23

    Or look for negative cofitness