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Cofit
Protein
Homologs
Top cofit genes for PP_3452 from
Pseudomonas putida KT2440
GGDEF domain protein
SEED: GGDEF domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_0570
lipoprotein of unknown function
no
0.27
2
PP
_2351
propionyl-CoA synthetase
no
0.24
3
PP
_0788
conserved protein of unknown function
no
0.23
4
PP
_1009
glyceraldehyde-3-phosphate dehydrogenase
no
0.22
5
PP
_5320
two-component system DNA-binding transcriptional dual response regulator PhoB
no
0.22
6
PP
_1011
glucokinase
no
0.22
7
PP
_3855
conserved protein of unknown function
no
0.22
8
PP
_3195
conserved protein of unknown function
no
0.21
9
PP
_4246
Periplasmic binding protein
no
0.21
10
PP
_3417
D-gluconate transporter
no
0.20
11
PP
_2586
putative amino acid transporter
no
0.20
12
PP
_4461
Major facilitator family transporter
no
0.20
13
PP
_3291
Metallo-beta-lactamase family protein
no
0.20
14
PP
_1644
NAD(P)H dehydrogenase (quinone)
no
0.20
15
PP
_5639
conserved exported protein of unknown function
no
0.20
16
PP
_1015
mannose/glucose ABC transporter, glucose-binding periplasmic protein
no
0.20
17
PP
_1811
UDP-N-acetylglucosamine-2-epimerase
no
0.20
18
PP
_4742
Type I restriction-modification system, S subunit
no
0.20
19
PP
_4911
conserved protein of unknown function
no
0.20
20
PP
_2364
conserved protein of unknown function
no
0.19
Or look for
negative cofitness