Top cofit genes for PP_3439 from Pseudomonas putida KT2440

Transcriptional regulator, AraC family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0804		Protein secretion ABC efflux system, permease and ATP-binding protein	no	0.25
2	PP_3359		putative Hydroxycinnamic acid degradation regulator	no	0.24
3	PP_0806		putative Surface adhesion protein	no	0.23
4	PP_0803		Protein secretion ABC efflux system, membrane fusion protein	no	0.23
5	PP_0805		Outer membrane efflux protein	no	0.22
6	PP_0574		DNA-binding response regulator, LuxR family	no	0.22
7	PP_5159		conserved protein of unknown function	no	0.19
8	PP_1364		conserved exported protein of unknown function	no	0.18
9	PP_0489		formate dehydrogenase-O major subunit	no	0.17
10	PP_2935		conserved membrane protein of unknown function	no	0.17
11	PP_0651		Acetyltransferase, GNAT family	no	0.16
12	PP_0043		cation efflux system protein	no	0.16
13	PP_0409		Sensory box histidine kinase	no	0.15
14	PP_3384		gluconate 2-dehydrogenase gamma subunit	0.45	0.15
15	PP_1368		putative membrane protein containing a glycosyltransferase domain	no	0.15
16	PP_5637		conserved protein of unknown function	no	0.15
17	PP_5009		conserved protein of unknown function	no	0.15
18	PP_3102		conserved protein of unknown function	no	0.15
19	PP_0164		conserved protein of unknown function	0.22	0.14
20	PP_3191		putative threonine ammonia-lyase / dehydratase	no	0.14

Or look for negative cofitness