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  • Top cofit genes for PP_3426 from Pseudomonas putida KT2440

    Multidrug efflux RND transporter MexF
    SEED: Multidrug efflux transporter MexF

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4755 Outer membrane ferrichrome-iron receptor no 0.36
    2 PP_0856 conserved lipoprotein of unknown function 0.59 0.28
    3 PP_1719 Tail-specific protease prc 0.68 0.26
    4 PP_1001 arginine deiminase 0.34 0.26
    5 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily no 0.25
    6 PP_4610 conserved protein of unknown function containing PepSY-associated TM helix domain no 0.24
    7 PP_1206 basic-amino-acid specific porin OprD 0.21 0.24
    8 PP_0998 conserved protein of unknown function 0.57 0.24
    9 PP_1202 putative enzyme involved in modification of phospholipids no 0.23
    10 PP_1238 putative Lipoprotein 0.91 0.22
    11 PP_4560 putative Ribonuclease BN 0.42 0.22
    12 PP_1201 conserved exported protein of unknown function no 0.22
    13 PP_1598 regulatory intramembrane protein RIP zinc protease 0.58 0.21
    14 PP_1002 arginine/ornithine antiporter 0.55 0.21
    15 PP_0999 carbamate kinase 0.16 0.21
    16 PP_2402 putative Sensor histidine kinase no 0.20
    17 PP_1232 conserved exported protein of unknown function 0.56 0.20
    18 PP_4538 FMN-dependent NADH-azoreductase 2 0.95 0.20
    19 PP_3425 Efflux transporter RND family, MFP subunit 0.98 0.20
    20 PP_1526 putative Beta-(1-3)-glucosyl transferase 0.42 0.19

    Or look for negative cofitness