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  • Top cofit genes for PP_3423 from Pseudomonas putida KT2440

    Type II secretion pathway protein XcpT
    SEED: General secretion pathway protein G
    KEGG: general secretion pathway protein G

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3399 minor curlin subunit CsgB, nucleation component of curlin monomers no 0.23
    2 PP_2036 putative 4-hydroxy-tetrahydrodipicolinate synthase no 0.22
    3 PP_0106 cytochrome c oxidase subunit 3 no 0.21
    4 PP_3565 Transporter, LysE family no 0.19
    5 PP_3421 Sensor histidine kinase no 0.18
    6 PP_5598 conserved protein of unknown function no 0.18
    7 PP_4284 putative Transporter no 0.18
    8 PP_4312 conserved exported protein of unknown function no 0.18
    9 PP_0090 conserved exported protein of unknown function no 0.18
    10 PP_2541 Transcriptional factor-related protein no 0.18
    11 PP_0086 conserved protein of unknown function no 0.18
    12 PP_2715 ArsH protein no 0.17
    13 PP_3420 Sensor histidine kinase no 0.17
    14 PP_0227 periplasmic cystine-binding protein no 0.17
    15 PP_1824 Smr domain protein no 0.17
    16 PP_2025 Exonuclease SbcD no 0.17
    17 PP_4660 Transcriptional regulator, LysR family no 0.17
    18 PP_2857 conserved exported protein of unknown function no 0.17
    19 PP_4535 conserved protein of unknown function no 0.17
    20 PP_3340 putative TonB-dependent receptor no 0.17

    Or look for negative cofitness