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Cofit
Protein
Homologs
Top cofit genes for PP_3422 from
Pseudomonas putida KT2440
Lytic transglycosylase
SEED: lytic transglycosylase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_0172
ABC transporter, permease protein
no
0.20
2
PP
_0506
putative ABC efflux transporter, permease protein
no
0.19
3
PP
_3055
Pyocin R2_PP, tail formation protein
no
0.19
4
PP
_2714
Sensor histidine kinase
no
0.19
5
PP
_3784
conserved protein of unknown function
no
0.19
6
PP
_0430
conserved protein of unknown function
0.35
0.17
7
PP
_0328
formaldehyde dehydrogenase
no
0.17
8
PP
_2476
NADPH-dependent curcumin/dihydrocurcumin reductase
no
0.17
9
PP
_3677
conserved protein of unknown function
no
0.17
10
PP
_2654
putative Glutathione S-transferase
no
0.16
11
PP
_3167
benzoate transport protein
no
0.16
12
PP
_5685
protein of unknown function
no
0.16
13
PP
_4461
Major facilitator family transporter
no
0.16
14
PP
_5462
conserved protein of unknown function
no
0.16
15
PP
_3656
putative Aromatic compound-specific porin
no
0.16
16
PP
_1953
Oxidoreductase, short chain dehydrogenase/reductase family
no
0.16
17
PP
_4428
Amino acid ABC transporter, periplasmic amino acid-binding protein
no
0.16
18
PP
_2651
Major facilitator family transporter
no
0.16
19
PP
_2983
conserved protein of unknown function
no
0.16
20
PP
_4455
glutathione ABC transporter permease subunit
no
0.15
Or look for
negative cofitness