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  • Top cofit genes for PP_3417 from Pseudomonas putida KT2440

    D-gluconate transporter
    SEED: Gluconate permease
    KEGG: gluconate:H+ symporter, GntP family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1011 glucokinase 0.96 0.61
    2 PP_5348 Transcriptional regulator, LysR family 0.97 0.59
    3 PP_5347 pyruvate carboxylase subunit A 0.98 0.59
    4 PP_1022 glucose 6-phosphate-1-dehydrogenase 0.95 0.59
    5 PP_1444 quinoprotein glucose dehydrogenase 0.72 0.56
    6 PP_5346 pyruvate carboxylase subunit B 0.97 0.55
    7 PP_0363 8-amino-7-oxononanoate synthase 0.73 0.53
    8 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.76 0.53
    9 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase 0.72 0.52
    10 PP_0364 pimeloyl-[acp] methyl ester esterase 0.56 0.51
    11 PP_1016 mannose/glucose ABC transporter, permease protein 0.93 0.51
    12 PP_0366 dethiobiotin synthetase 0.67 0.49
    13 PP_1017 mannose/glucose ABC transporter, permease protein 0.91 0.49
    14 PP_1015 mannose/glucose ABC transporter, glucose-binding periplasmic protein 0.84 0.49
    15 PP_1362 pyruvate kinase II 0.95 0.48
    16 PP_5639 conserved exported protein of unknown function no 0.48
    17 PP_1013 Sensor histidine kinase 0.64 0.47
    18 PP_0362 Biotin synthase 0.65 0.46
    19 PP_1009 glyceraldehyde-3-phosphate dehydrogenase 0.93 0.46
    20 PP_0570 lipoprotein of unknown function no 0.45

    Or look for negative cofitness