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  • Top cofit genes for PP_3405 from Pseudomonas putida KT2440

    conserved membrane protein of unknown function
    SEED: Transporter, LysE family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit no 0.20
    2 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.42 0.20
    3 PP_0971 conserved protein of unknown function no 0.20
    4 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 no 0.20
    5 PP_2971 transposase no 0.20
    6 PP_1532 putative Phage integrase no 0.19
    7 PP_0757 conserved protein of unknown function no 0.19
    8 PP_0619 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein no 0.19
    9 PP_4375 flagellar chaperone, inhibits premature FliC assembly no 0.19
    10 PP_4057 conserved membrane protein of unknown function with autotransporter beta-domain no 0.19
    11 PP_0396 conserved protein of unknown function 0.75 0.19
    12 PP_0970 Cyanate MFS transporter 0.49 0.18
    13 PP_4849 putative DnaK protein 0.40 0.18
    14 PP_0397 protein kinase 0.69 0.18
    15 PP_4379 Beta-ketoacyl-acyl-carrier-protein synthase I no 0.18
    16 PP_2912 conserved protein of unknown function no 0.18
    17 PP_3649 Transcriptional regulator, GntR family 0.39 0.18
    18 PP_0395 putative type IV piliation protein 0.64 0.18
    19 PP_0504 Outer membrane protein OprG no 0.17
    20 PP_0951 Ribosome hibernation promoting factor 0.41 0.17

    Or look for negative cofitness