Top cofit genes for PP_3400 from Pseudomonas putida KT2440

alpha-ketoglutarate- and Fe(II)-dependent dioxygenase
SEED: Alkylated DNA repair protein AlkB
KEGG: alkylated DNA repair protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_t11		tRNA-Lys	no	0.24
2	PP_4676		methionine sulfoxide reductase catalytic subunit	0.30	0.23
3	PP_2806		Transcriptional regulator, TetR family	no	0.21
4	PP_2337		aconitate isomerase	0.38	0.20
5	PP_2336		aconitate hydratase 1	0.42	0.20
6	PP_4004		DNA translocase FtsK	no	0.20
7	PP_3073		3-hydroxybutyrate dehydrogenase	0.69	0.19
8	PP_4121		NADH-quinone oxidoreductase subunit C/D	no	0.19
9	PP_4129		NADH:ubiquinone oxidoreductase, membrane subunit L	no	0.19
10	PP_4880		exoribonuclease R	0.54	0.19
11	PP_1629		Protein RecA	0.52	0.19
12	PP_2808		putative Oxidoreductase	no	0.19
13	PP_4261		cation-transporting P-type ATPase	0.30	0.19
14	PP_3104		conserved protein of unknown function	no	0.19
15	PP_4988		signal transduction histidine kinase CheA/CheY-like receiver	no	0.18
16	PP_1994		tRNA pseudouridine (38-40)synthase	0.45	0.18
17	PP_5310		junction-specific ATP-dependent DNA helicase	0.57	0.18
18	PP_1903		putative phosphotyrosine-protein phosphatase	no	0.18
19	PP_5157		conserved exported protein of unknown function	no	0.18
20	PP_3421		Sensor histidine kinase	no	0.18

Or look for negative cofitness