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  • Top cofit genes for PP_3398 from Pseudomonas putida KT2440

    putative Curli fiber surface-exposed nucleator CsgB
    SEED: Minor curlin subunit CsgB, nucleation component of curlin monomers
    KEGG: minor curlin subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0534 putative Transcriptional regulator PfeR no 0.23
    2 PP_5322 putative metal ion transporter no 0.22
    3 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein no 0.22
    4 PP_3054 Pyocin R2_PP, baseplate/tail fiber protein no 0.22
    5 PP_3232 Acetyltransferase, GNAT family no 0.19
    6 PP_0227 periplasmic cystine-binding protein no 0.19
    7 PP_5262 Probable multidrug resistance protein NorM no 0.19
    8 PP_5743 putative TonB-dependent receptor protein no 0.18
    9 PP_2832 galactose-binding protein regulator no 0.18
    10 PP_5265 Xanthine phosphoribosyltransferase no 0.18
    11 PP_1967 tRNA D-aminoacylase no 0.18
    12 PP_4547 putative Glutamine synthetase no 0.18
    13 PP_4841 putative Urea ABC transporter, periplasmic protein no 0.18
    14 PP_1124 conserved membrane protein of unknown function no 0.17
    15 PP_4606 putative Outer membrane ferric siderophore receptor no 0.17
    16 PP_1454 conserved protein of unknown function no 0.17
    17 PP_2434 conserved protein of unknown function no 0.17
    18 PP_4219 non-ribosomal peptide synthetase no 0.17
    19 PP_4160 K+ transporting ATPase, KdpB subunit no 0.17
    20 PP_1631 conserved protein of unknown function no 0.17

    Or look for negative cofitness