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  • Top cofit genes for PP_3394 from Pseudomonas putida KT2440

    putative 3-hydroxy-3-methylglutaryl-CoA lyase
    SEED: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
    KEGG: hydroxymethylglutaryl-CoA lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3790 diaminopimelate epimerase no 0.23
    2 PP_3787 conserved protein of unknown function no 0.20
    3 PP_3789 putative Efflux transporter no 0.20
    4 PP_4922 Phosphomethylpyrimidine synthase 0.28 0.19
    5 PP_1687 conserved exported protein of unknown function no 0.18
    6 PP_4209 ABC export system, membrane fusion protein no 0.18
    7 PP_3547 putative NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain no 0.17
    8 PP_4162 conserved membrane protein of unknown function no 0.17
    9 PP_4057 conserved membrane protein of unknown function with autotransporter beta-domain no 0.17
    10 PP_3788 putative Non-ribosomal peptide synthetase no 0.16
    11 PP_0718 Sulfate transporter no 0.16
    12 PP_2330 conserved protein of unknown function no 0.16
    13 PP_4856 Ferritin, Dps family protein no 0.16
    14 PP_0506 putative ABC efflux transporter, permease protein no 0.16
    15 PP_3930 conserved exported protein of unknown function no 0.16
    16 PP_4011 isocitrate dehydrogenase, NADP(+)-specific 0.37 0.16
    17 PP_1559 Holin no 0.16
    18 PP_5104 thiazole synthase no 0.15
    19 PP_1368 putative membrane protein containing a glycosyltransferase domain no 0.15
    20 PP_3173 N-ethylmaleimide reductase, FMN-linked no 0.15

    Or look for negative cofitness