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  • Top cofit genes for PP_3390 from Pseudomonas putida KT2440

    putative Porin
    SEED: Tricarboxylate porin OpdH

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1445 carbohydrate-selective porin no 0.19
    2 PP_2240 putative ABC efflux transporter, permease/ATP-binding protein no 0.19
    3 PP_3847 Transcriptional regulator, LuxR family no 0.18
    4 PP_t29 tRNA-Ala no 0.18
    5 PP_1907 Hydrolase, haloacid dehalogenase-like family no 0.18
    6 PP_5537 conserved membrane protein of unknown function no 0.18
    7 PP_2210 LysR family transcriptional regulator no 0.17
    8 PP_4542 putative ABC transporter, ATP-binding protein/permease protein no 0.17
    9 PP_3575 Outer membrane ferric siderophore receptor no 0.17
    10 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily no 0.17
    11 PP_4559 peptide deformylase no 0.17
    12 PP_4100 Transcriptional regulator, Cro/CI family no 0.16
    13 PP_3423 Type II secretion pathway protein XcpT no 0.16
    14 PP_0574 DNA-binding response regulator, LuxR family no 0.16
    15 PP_5522 protein of unknown function no 0.16
    16 PP_3692 conserved protein of unknown function no 0.16
    17 PP_3463 phenylacetaldehyde dehydrogenase no 0.16
    18 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.16
    19 PP_3920 putative Phage integrase no 0.16
    20 PP_5686 protein of unknown function no 0.16

    Or look for negative cofitness