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  • Top cofit genes for PP_3378 from Pseudomonas putida KT2440

    putative 2-ketogluconokinase
    SEED: 2-ketogluconate kinase (EC 2.7.1.13)
    KEGG: dehydrogluconokinase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3377 2-ketogluconate transporter, putative 0.73 0.32
    2 PP_1553 conserved protein of unknown function no 0.23
    3 PP_0122 conserved exported protein of unknown function no 0.21
    4 PP_4319 conserved exported protein of unknown function 0.32 0.20
    5 PP_5350 Transcriptional regulator, RpiR family 0.45 0.20
    6 PP_3770 conserved protein of unknown function no 0.19
    7 PP_3634 putative acetyltransferase, GNAT family 0.42 0.19
    8 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.52 0.19
    9 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase no 0.19
    10 PP_3380 2-ketogluconate utilization repressor 0.64 0.18
    11 PP_0363 8-amino-7-oxononanoate synthase 0.25 0.18
    12 PP_2585 Alpha-ketoglutaric semialdehyde dehydrogenase no 0.18
    13 PP_0366 dethiobiotin synthetase 0.31 0.18
    14 PP_1552 putative Phage replication protein no 0.18
    15 PP_4270 conserved exported protein of unknown function no 0.17
    16 PP_1251 malate:quinone oxidoreductase 0.56 0.17
    17 PP_0364 pimeloyl-[acp] methyl ester esterase no 0.17
    18 PP_3260 DNA ligase D no 0.17
    19 PP_5639 conserved exported protein of unknown function no 0.17
    20 PP_5227 diaminopimelate decarboxylase 0.27 0.17

    Or look for negative cofitness