Top cofit genes for PP_3366 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3957		choline/carnitine/betaine transporter BetTC	no	0.24
2	PP_1786		putative Glycosyl transferase	no	0.23
3	PP_4824		Sensor histidine kinase/response regulator	0.51	0.22
4	PP_1714		FKBP-type peptidyl-prolyl cis-trans isomerase	no	0.22
5	PP_4710		tRNA pseudouridine 55 synthase	no	0.21
6	PP_1795		conserved protein of unknown function	no	0.20
7	PP_4988		signal transduction histidine kinase CheA/CheY-like receiver	no	0.20
8	PP_4722		Transcription elongation factor GreA	no	0.19
9	PP_0674		ADP/ATP ratio sensor and inhibitor of translation	0.47	0.19
10	PP_4653		adenine:H+ symporter	no	0.19
11	PP_0503		Major facilitator family transporter	no	0.19
12	PP_1527		tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase)	0.29	0.19
13	PP_1675		Subunit of adenosylcobinamide-phosphate synthase beta component	no	0.19
14	PP_2455		ribose ABC transporter - ATP-binding subunit	no	0.19
15	PP_1320		stringent starvation protein A	0.32	0.19
16	PP_2357		putative Type 1 pili protein CsuB	no	0.18
17	PP_1672		cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase	0.27	0.18
18	PP_1793		Glycosyl transferase, group 2 family protein	no	0.18
19	PP_4700		pantothenate synthetase	0.15	0.18
20	PP_2641		Iron-sulfur cluster-binding protein	no	0.17

Or look for negative cofitness