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  • Top cofit genes for PP_3357 from Pseudomonas putida KT2440

    p-hydroxybenzaldehyde dehydrogenase vdh (EC 1.2.1.64) (from data)
    Original annotation: vanillin dehydrogenase
    SEED: Vanillin dehydrogenase (Hydroxybenzaldehyde dehydrogenase) (EC 1.2.1.28)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3356 p-coumarate CoA-ligase (EC 6.2.1.12) (from data) 0.94 0.82
    2 PP_3358 hydroxycinnamoyl-CoA hydratase-lyase (EC 4.1.2.61) (from data) 0.94 0.79
    3 PP_3537 p-hydroxybenzoate hydroxylase 0.79 0.53
    4 PP_3538 transcriptional regulator 0.79 0.49
    5 PP_3951 3-oxoadipate CoA-transferase subunit A 0.29 0.45
    6 PP_1379 3-carboxy-cis,cis-muconate cycloisomerase 0.82 0.44
    7 PP_1377 beta-ketoadipyl-CoA thiolase 0.82 0.44
    8 PP_4655 protocatechuate 3,4-dioxygenase alpha chain 0.78 0.43
    9 PP_1378 alpha-ketoglutarate permease 0.72 0.42
    10 PP_3952 3-oxoadipate CoA-transferase subunit A 0.27 0.42
    11 PP_4656 protocatechuate 3,4-dioxygenase beta chain 0.81 0.41
    12 PP_1375 transcription regulatory protein (pca regulon) 0.75 0.40
    13 PP_1380 3-oxoadipate enol-lactonase 2 0.82 0.40
    14 PP_1381 4-carboxymuconolactone decarboxylase 0.82 0.32
    15 PP_1713 Transcriptional regulator PcaQ 0.30 0.29
    16 PP_3737 vanillate O-demethylase oxidoreductase 0.74 0.28
    17 PP_3736 vanillate O-demethylase oxygenase subunit 0.52 0.27
    18 PP_2356 putative Phytochrome family protein 0.17 0.25
    19 PP_0096 oligopeptidase A 0.53 0.25
    20 PP_2354 Sensory box histidine kinase/response regulator no 0.25

    Or look for negative cofitness