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  • Top cofit genes for PP_3340 from Pseudomonas putida KT2440

    putative TonB-dependent receptor
    SEED: Outer membrane receptor proteins, mostly Fe transport
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4162 conserved membrane protein of unknown function no 0.28
    2 PP_3722 Alanine racemase no 0.24
    3 PP_3733 putative ABC transporter lipoprotein no 0.22
    4 PP_3717 Transcriptional regulator, LuxR family no 0.22
    5 PP_1828 conserved protein of unknown function no 0.22
    6 PP_4492 carbohydrate efflux transporter no 0.22
    7 PP_2026 conserved protein of unknown function no 0.20
    8 PP_2824 Transcriptional regulator, TetR family no 0.20
    9 PP_5572 protein of unknown function no 0.20
    10 PP_2870 putative spermidine/putrescine-binding periplasmic protein no 0.20
    11 PP_1882 conserved membrane protein of unknown function no 0.20
    12 PP_4057 conserved membrane protein of unknown function with autotransporter beta-domain no 0.19
    13 PP_2597 conserved protein of unknown function no 0.19
    14 PP_1302 putative metal-binding hydrolase-oxidase enzyme no 0.19
    15 PP_3811 Transcriptional regulator, LysR family no 0.19
    16 PP_2994 Oxidoreductase, FMN-binding no 0.19
    17 PP_2003 conserved protein of unknown function no 0.18
    18 PP_1875 Sensor histidine kinase/response regulator no 0.18
    19 PP_0561 thiol/disulfide interchange protein 1 no 0.18
    20 PP_3888 conserved protein of unknown function no 0.18

    Or look for negative cofitness