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  • Top cofit genes for PP_3331 from Pseudomonas putida KT2440

    conserved membrane protein of unknown function
    SEED: Optional hypothetical component of the B12 transporter BtuN

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2771 Sigma-54 dependent transcriptional regulator no 0.21
    2 PP_0750 conserved protein of unknown function no 0.17
    3 PP_1631 conserved protein of unknown function no 0.16
    4 PP_3044 Phage portal protein, lambda family no 0.16
    5 PP_1721 putative phosphoserine phosphatase no 0.16
    6 PP_3733 putative ABC transporter lipoprotein no 0.16
    7 PP_2004 Transcriptional regulator, AraC family no 0.15
    8 PP_3726 Enoyl-CoA hydratase/isomerase family protein 0.19 0.15
    9 PP_3741 transpeptidase (penicillin-binding protein 2) no 0.15
    10 PP_2616 conserved protein of unknown function no 0.15
    11 PP_3620 cofactor of beta-methylthiolation of ribosomal protein S12 0.23 0.15
    12 PP_2684 conserved membrane protein of unknown function no 0.15
    13 PP_3304 Multidrug resistance transporter, Bcr/CflA family no 0.15
    14 PP_5563 conserved membrane protein of unknown function no 0.15
    15 PP_4056 putative phosphohydrolase of unknown function 0.29 0.15
    16 PP_2574 Transcriptional regulator, LysR family no 0.14
    17 PP_0669 Outer membrane ferric siderophore receptor no 0.14
    18 PP_2681 coenzyme PQQ synthesis protein D no 0.14
    19 PP_5106 conserved inner membrane protein no 0.14
    20 PP_3763 putative CobF protein no 0.14

    Or look for negative cofitness