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  • Top cofit genes for PP_3328 from Pseudomonas putida KT2440

    putative Ring-cleaving dioxygenase
    SEED: ring-cleaving dioxygenase, putative

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3788 putative Non-ribosomal peptide synthetase no 0.24
    2 PP_2714 Sensor histidine kinase no 0.24
    3 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.22
    4 PP_3790 diaminopimelate epimerase no 0.22
    5 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase 0.37 0.21
    6 PP_4922 Phosphomethylpyrimidine synthase no 0.19
    7 PP_3376 putative phosphonate dehydrogenase 0.58 0.19
    8 PP_0892 Phospholipase family protein no 0.18
    9 PP_1644 NAD(P)H dehydrogenase (quinone) no 0.18
    10 PP_3787 conserved protein of unknown function no 0.18
    11 PP_3786 aminotransferase no 0.18
    12 PP_2926 UDP-glucose 6-dehydrogenase 0.27 0.18
    13 PP_3369 Transcriptional regulator, LysR family no 0.17
    14 PP_0033 putative undecaprenyl-glycosyl transferase no 0.17
    15 PP_1301 quality control serine endoprotease DegS no 0.17
    16 PP_1109 Transcriptional regulator, GntR family no 0.17
    17 PP_1233 sulfurtransferase no 0.17
    18 PP_4497 conserved protein of unknown function no 0.17
    19 PP_2132 Universal stress protein no 0.17
    20 PP_2988 Alcohol dehydrogenase, zinc-containing no 0.17

    Or look for negative cofitness