Top cofit genes for PP_3319 from Pseudomonas putida KT2440

Sensory box protein/GGDEF domain protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4335		flagellar motor protein	no	0.30
2	PP_4336		flagellar motor rotation protein	no	0.28
3	PP_4371		two component system AtoC DNA-binding transcriptional activator	no	0.27
4	PP_4366		flagellum-specific ATP synthase	no	0.26
5	PP_4369		Flagellar M-ring protein	0.33	0.25
6	PP_4368		flagellar motor switch protein	0.38	0.25
7	PP_4354		flagellar export apparatus subunit	0.34	0.25
8	PP_4359		Flagellar protein FliL	no	0.25
9	PP_4394		flagella basal body P-ring formation protein	no	0.24
10	PP_4353		Flagellar biosynthetic protein fliR	0.39	0.24
11	PP_4361		Flagellar hook-length control protein FliK	no	0.24
12	PP_4358		flagellar synthesis, switching and energizing component	0.35	0.23
13	PP_4382		Peptidoglycan hydrolase FlgJ	0.44	0.23
14	PP_4352		flagellin export apparatus, substrate specificity protein	0.38	0.23
15	PP_4384		Flagellar L-ring protein	0.43	0.23
16	PP_1087		Outer membrane protein, OmpA family	no	0.23
17	PP_4365		Flagellar protein FliJ	no	0.22
18	PP_4389		Flagellar basal-body rod modification protein FlgD	0.41	0.22
19	PP_0914		GGDEF domain protein	no	0.22
20	PP_4344		flagellar export pore protein	0.41	0.22

Or look for negative cofitness