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  • Top cofit genes for PP_3316 from Pseudomonas putida KT2440

    putative Chaperone-associated ATPase
    SEED: ATP-dependent Clp protease ATP-binding subunit ClpA
    KEGG: ATP-dependent Clp protease ATP-binding subunit ClpC

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3544 Transcriptional regulator, GntR family 0.70 0.17
    2 PP_2152 glycerophosphoryl diester phosphodiesterase no 0.16
    3 PP_1929 arsenite/antimonite transporter no 0.16
    4 PP_2743 Acetyltransferase, GNAT family no 0.16
    5 PP_5718 conserved membrane protein of unknown function no 0.15
    6 PP_2988 Alcohol dehydrogenase, zinc-containing no 0.15
    7 PP_4316 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.15
    8 PP_4555 conserved protein of unknown function no 0.15
    9 PP_4507 potassium transporter 0.26 0.14
    10 PP_3041 conserved protein of unknown function no 0.14
    11 PP_5704 conserved protein of unknown function no 0.14
    12 PP_5591 conserved protein of unknown function no 0.13
    13 PP_4989 Protein PilJ no 0.13
    14 PP_3338 putative cytochrome bd-type quinol oxidase no 0.13
    15 PP_2309 conserved protein of unknown function no 0.13
    16 PP_4797 conserved protein of unknown function no 0.13
    17 PP_1756 conserved exported protein of unknown function no 0.13
    18 PP_3718 putative aminotransferase no 0.13
    19 PP_0065 NAD-binding component of TrK potassium transporter 0.26 0.13
    20 PP_1971 conserved protein of unknown function no 0.13

    Or look for negative cofitness